Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Sunday, April 28 2024

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Submission

10016 : T0952

Your submitted sequence: sequence (35 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 38 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.8	21.706	0.100	0.097	0.085	1DD3_A	N/A
2	ffas.1	-0.422E+01	0.110	0.047	-0.207	1F3K_A	N/A
3	rpsblast.1	0.055	0.117	0.140	0.231	1IBQ_B	2.40.70.10.4.1 2.40.70.10.1.1
4	rpsblast.2	0.11	0.131	0.102	-0.015	1IZE_A	2.40.70.10.4.1 2.40.70.10.1.1
5	blast.5	16	0.148	0.119	0.003	1JCN_A	3.20.20.70.70.1
6	ffas.3	-0.415E+01	0.177	0.175	0.168	1K77_A	3.20.20.150.5.1
7	pgenthreader.1	24.153	0.164	0.151	0.100	1NWD_B	N/A
8	blast.9	21	0.138	0.121	0.053	1QQF_A	1.50.10.20.2.1
9	rpsblast.4	2.3	0.115	0.011	-0.406	1QZV_U	N/A
10	ffas.10	-0.368E+01	0.114	0.000	-0.456	1XC0_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.