Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Monday, May 6 2024

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Submission

22973 : Repeat3-Q13936

Your submitted sequence: sequence (339 aa)

Ready methods: PCONS PMODELLER blast rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 20 models from 2 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.2	3e-11	0.026	0.060	0.198	1ORS_C	1.20.120.350.1.1
2	rpsblast.8	7e-04	0.004	-0.006	-0.048	2LCM_A	N/A
3	rpsblast.10	0.015	0.020	0.075	0.295	2PFF_B	N/A
4	rpsblast.4	2e-09	0.055	0.130	0.431	3RVY_B	N/A
5	rpsblast.7	4e-04	0.031	0.067	0.209	3WKV_A	N/A
6	rpsblast.9	0.002	0.000	-0.002	-0.009	3WKV_A	N/A
7	rpsblast.6	1e-06	0.059	0.099	0.261	3ZJZ_B	N/A
8	blast.8	0.65	0.031	0.051	0.133	4BGN_A	N/A
9	rpsblast.1	1e-14	0.059	0.146	0.495	4BGN_A	N/A
10	rpsblast.5	2e-08	0.065	0.151	0.494	4DXW_D	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.