Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Monday, April 29 2024

Main Menu

Submission

22985 : NP_001129064.1

Your submitted sequence: sequence (312 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 45 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.8	88.331	0.146	0.151	0.169	1C3T_A	3.10.20.90.1.1
2	ffas.17	-0.451E+02	0.099	0.105	0.129	1TTN_A	N/A
3	rpsblast.9	9e-46	0.163	0.162	0.156	1V5O_A	3.10.20.90.30.1
4	ffas.18	-0.451E+02	0.134	0.142	0.173	1WH3_A	N/A
5	blast.3	3e-48	0.151	0.159	0.190	1YX5_B	3.10.20.90.1.1
6	blast.4	3e-48	0.151	0.159	0.190	1YX5_B	3.10.20.90.1.1
7	ffas.12	-0.467E+02	0.151	0.159	0.190	1YX5_B	3.10.20.90.1.1
8	pgenthreader.6	89.419	0.151	0.162	0.206	2GBJ_A	3.10.20.90.1.1
9	pgenthreader.4	90.645	0.142	0.150	0.184	2GBM_A	3.10.20.90.1.1
10	ffas.20	-0.449E+02	0.125	0.128	0.140	2JVC_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.