Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

22992 : LCL|ORF1

Your submitted sequence: sequence (245 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 33 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.2	49.230	0.162	0.166	0.184	3P57_A	N/A
2	blast.2	2e-22	0.171	0.163	0.133	1EGW_D	N/A
3	blast.1	2e-22	0.166	0.160	0.135	3P57_A	N/A
4	pgenthreader.3	48.052	0.154	0.158	0.176	1N6J_A	N/A
5	pgenthreader.1	49.994	0.158	0.154	0.137	1EGW_A	N/A
6	pgenthreader.5	41.021	0.151	0.149	0.141	1HBX_A	N/A
7	rpsblast.2	1e-27	0.140	0.148	0.181	3P57_I	N/A
8	ffas.2	-0.555E+02	0.137	0.146	0.180	3KOV_A	N/A
9	pgenthreader.4	42.556	0.151	0.145	0.119	1MNM_A	N/A
10	rpsblast.3	6e-24	0.144	0.142	0.133	1EGW_D	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.