Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

22994 : Taqpep_cat

Your submitted sequence: sequence (420 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 40 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.4	17.000	0.493	0.531	0.681	4JBS_A	N/A
2	pgenthreader.8	163.754	0.497	0.526	0.644	2YD0_A	N/A
3	pgenthreader.1	182.299	0.487	0.524	0.672	4FKE_A	N/A
4	pgenthreader.2	14.000	0.482	0.521	0.678	4FYT_A	N/A
5	ffas.2	-0.879E+02	0.478	0.521	0.694	3SE6_A	N/A
6	blast.2	4e-81	0.484	0.521	0.667	4FYT_A	N/A
7	pgenthreader.6	14.142	0.482	0.515	0.645	4KX7_A	N/A
8	ffas.3	-0.858E+02	0.471	0.514	0.685	3QNF_A	N/A
9	ffas.1	-0.891E+02	0.472	0.513	0.678	3MDJ_A	N/A
10	rpsblast.3	1e-42	0.466	0.508	0.677	4FYT_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.