Pcons.net Protein Structure Prediction

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Friday, April 19 2024

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Submission

22996 : id:22995:51-232

Your submitted sequence: sequence (182 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.1	0.008	0.121	0.112	0.074	4QBM_A	N/A
2	pgenthreader.1	30.743	0.035	0.073	0.223	4KT6_A	N/A
3	pgenthreader.2	28.814	0.043	0.072	0.186	3KO1_A	N/A
4	pgenthreader.5	27.091	0.047	0.059	0.109	1C0A_A	2.40.50.140.5.2 3.30.930.10.4.2 3.30.1360.30.1.2
5	pgenthreader.3	15.211	0.038	0.059	0.144	2RRL_A	N/A
6	ffas.4	-0.682E+01	0.044	0.051	0.079	3UV2_A	N/A
7	pgenthreader.10	26.499	0.037	0.047	0.089	3NVW_B	N/A
8	pgenthreader.8	26.559	0.032	0.047	0.108	3I99_A	N/A
9	ffas.5	-0.680E+01	0.041	0.046	0.064	3Q2E_A	N/A
10	ffas.3	-0.682E+01	0.042	0.045	0.059	2E7O_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.