Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 18 2024

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Submission

22997 : 2LPJ

Your submitted sequence: sequence (35 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 31 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.10	-0.323E+01	0.145	0.199	0.414	3GKX_A	N/A
2	pgenthreader.7	24.410	0.174	0.198	0.294	4GIP_D	N/A
3	ffas.6	-0.345E+01	0.150	0.198	0.390	3FZ4_A	N/A
4	ffas.5	-0.346E+01	0.182	0.195	0.246	2LLK_A	N/A
5	ffas.9	-0.326E+01	0.153	0.175	0.261	2F1F_A	N/A
6	ffas.1	-0.196E+02	0.126	0.172	0.358	2G38_A	N/A
7	pgenthreader.2	30.111	0.171	0.172	0.175	1WFB_A	N/A
8	rpsblast.4	1.6	0.175	0.156	0.079	2PFF_B	N/A
9	pgenthreader.8	24.366	0.162	0.152	0.113	2V7S_A	N/A
10	pgenthreader.3	27.584	0.166	0.148	0.074	3CAY_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.