Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Monday, May 6 2024

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Submission

23036 : hppA

Your submitted sequence: sequence (245 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 48 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.11	-0.209E+02	0.144	0.159	0.218	1MH9_A	3.40.50.1000.10.1 1.10.40.40.1.1
2	ffas.5	-0.579E+02	0.205	0.223	0.296	1N8N_A	3.40.50.1000.13.1
3	blast.9	3.8	0.067	0.059	0.025	1NBA_A	3.40.50.850.6.1
4	pgenthreader.10	37.717	0.169	0.198	0.315	1NNL_A	3.40.50.1000.8.1
5	blast.7	0.95	0.019	0.015	-0.003	1NZ8_A	3.30.70.940.2.1
6	ffas.10	-0.214E+02	0.178	0.207	0.324	1U7O_A	N/A
7	ffas.8	-0.254E+02	0.150	0.155	0.173	1XPJ_A	N/A
8	ffas.6	-0.575E+02	0.205	0.223	0.293	1Z5G_A	3.40.50.1000.13.1
9	pgenthreader.6	44.886	0.210	0.234	0.329	1Z88_A	3.40.50.1000.13.1
10	pgenthreader.5	46.254	0.209	0.235	0.341	2B82_A	3.40.50.1000.13.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.