Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, May 4 2024

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Submission

23043 : id:23042:85-424

Your submitted sequence: sequence (340 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 48 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.17	-0.335E+02	0.118	0.117	0.111	1AU7_A	1.10.260.40.1.2 1.10.10.60.9.1
2	rpsblast.6	7e-21	0.101	0.094	0.068	1DU6_A	1.10.10.60.12.1
3	ffas.13	-0.337E+02	0.112	0.107	0.087	1E3O_C	1.10.260.40.1.1 1.10.10.60.14.1
4	ffas.3	-0.366E+02	0.123	0.118	0.098	1FJL_A	1.10.10.60.2.1
5	pgenthreader.5	49.699	0.131	0.124	0.098	1FJL_A	1.10.10.60.2.1
6	rpsblast.1	6e-22	0.114	0.108	0.082	1FTZ_A	N/A
7	ffas.19	-0.328E+02	0.115	0.113	0.104	1GT0_C	1.10.260.40.1.1 1.10.10.60.9.2
8	ffas.5	-0.362E+02	0.112	0.109	0.098	1IC8_A	1.10.8.170.1.1 1.10.10.60.31.1
9	blast.8	1e-05	0.120	0.114	0.088	1IG7_A	1.10.10.60.3.2
10	blast.4	2e-06	0.119	0.112	0.086	1JGG_B	1.10.10.60.4.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.