Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23130 : CD8

Your submitted sequence: sequence (220 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.10	-0.505E+02	0.228	0.242	0.297	3SOB_L	N/A
2	ffas.20	-0.497E+02	0.226	0.241	0.302	2R8S_L	N/A
3	ffas.19	-0.498E+02	0.229	0.241	0.288	3FMG_L	N/A
4	pgenthreader.1	68.526	0.236	0.241	0.259	2HP4_A	N/A
5	pgenthreader.2	63.767	0.240	0.241	0.243	1NEZ_G	2.60.40.10.105.1
6	ffas.18	-0.498E+02	0.224	0.240	0.304	3KR3_L	N/A
7	ffas.14	-0.501E+02	0.225	0.240	0.299	3PGF_L	N/A
8	blast.4	2e-19	0.233	0.239	0.265	1NEZ_G	2.60.40.10.105.1
9	ffas.17	-0.498E+02	0.226	0.239	0.290	3BKC_L	N/A
10	ffas.13	-0.502E+02	0.221	0.238	0.305	1PKQ_A	2.60.40.10.3.2 2.60.40.10.2.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.