Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 18 2024

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Submission

23170 : XP_0049

Your submitted sequence: sequence (294 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.1	1e-105	0.269	0.364	0.745	2AOT_B	3.40.50.150.43.1
2	pgenthreader.1	162.890	0.235	0.338	0.751	2AOT_A	3.40.50.150.43.1
3	ffas.1	-0.797E+02	0.218	0.328	0.766	1JQD_A	3.40.50.150.43.1
4	rpsblast.1	8e-09	0.239	0.306	0.576	2AOT_B	3.40.50.150.43.1
5	pgenthreader.6	68.338	0.212	0.235	0.326	1VL5_A	3.40.50.150.17.1
6	pgenthreader.2	71.739	0.197	0.229	0.357	1XXL_A	3.40.50.150.26.1
7	pgenthreader.10	63.878	0.186	0.220	0.355	2YQZ_A	N/A
8	ffas.7	-0.310E+02	0.173	0.218	0.397	3CCF_A	N/A
9	ffas.14	-0.304E+02	0.181	0.217	0.362	1VL5_A	3.40.50.150.17.1
10	rpsblast.9	0.047	0.200	0.217	0.283	3CCF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.