Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, May 2 2024

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Submission

23177 : Coll_thr_mutated

Your submitted sequence: sequence (716 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 32 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.8	-0.117E+02	0.000	0.005	0.025	1LI1_A	2.170.240.10.1.1
2	ffas.12	-0.926E+01	0.000	0.004	0.019	1LI1_C	2.170.240.10.1.1
3	ffas.7	-0.118E+02	0.000	0.004	0.019	1M3D_A	2.170.240.10.1.1
4	ffas.11	-0.932E+01	0.000	0.005	0.026	1M3D_C	2.170.240.10.1.1
5	ffas.10	-0.102E+02	0.000	0.009	0.043	1NAY_A	1.20.5.320.1.2
6	ffas.3	-0.273E+02	0.002	0.015	0.068	1WCK_A	N/A
7	blast.10	4.2	0.001	0.002	0.007	2F86_B	3.10.450.50.14.2
8	ffas.5	-0.144E+02	0.000	0.010	0.052	2PNE_A	N/A
9	pgenthreader.10	35.420	0.000	0.013	0.064	2PNE_A	N/A
10	ffas.6	-0.143E+02	0.000	0.010	0.050	3BOG_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.