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© Arne Elofsson

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23190 :

Your submitted sequence: sequence (446 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 48 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.2
16.1670.4830.4860.497 4GV1_AN/A
2
pgenthreader.4
16.1820.4790.4820.496 1O6L_A1.10.510.10.5.1 3.30.200.20.34.1
3
rpsblast.3
1e-1540.4690.4740.493 1O6L_A1.10.510.10.5.1 3.30.200.20.34.1
4
pgenthreader.6
231.0070.4630.4700.498 1RDQ_E1.10.510.10.1.1 3.30.200.20.31.1
5
pgenthreader.8
18.1840.4670.4680.474 2JED_AN/A
6
pgenthreader.10
222.7300.4610.4620.468 3IW4_AN/A
7
pgenthreader.7
227.2650.4570.4620.483 3A8X_AN/A
8
blast.1
0.00.4500.4590.494 4GV1_AN/A
9
blast.2
0.00.4500.4590.493 1O6L_A1.10.510.10.5.1 3.30.200.20.34.1
10
ffas.5
-0.104E+030.4350.4450.484 2JDO_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center