Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23193 : id:23192:71-479

Your submitted sequence: sequence (409 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.1	81.136	0.100	0.141	0.304	3NCX_A	N/A
2	blast.1	1e-130	0.098	0.140	0.307	3NCX_A	N/A
3	ffas.2	-0.379E+02	0.081	0.137	0.363	1F00_I	2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
4	blast.3	2e-56	0.094	0.133	0.287	1F00_I	2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
5	ffas.1	-0.497E+02	0.088	0.129	0.293	2ZQK_A	N/A
6	rpsblast.10	0.68	0.090	0.127	0.277	1F00_I	2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
7	rpsblast.3	8e-11	0.086	0.119	0.249	3NCX_A	N/A
8	pgenthreader.3	20.100	0.081	0.091	0.129	1F00_I	2.60.40.920.1.1 2.60.40.1080.1.1 3.10.100.10.25.1
9	pgenthreader.9	46.034	0.017	0.042	0.141	3QC5_X	N/A
10	pgenthreader.6	51.784	0.013	0.038	0.137	3F85_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.