Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Monday, May 6 2024

Main Menu

Submission

23212 : A5

Your submitted sequence: sequence (161 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 48 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.4	1e-37	0.463	0.468	0.489	1F5M_A	3.30.450.40.2.1
2	ffas.4	-0.850E+02	0.592	0.635	0.807	1F5M_A	3.30.450.40.2.1
3	pgenthreader.5	84.696	0.529	0.590	0.833	1F5M_A	3.30.450.40.2.1
4	rpsblast.9	5e-18	0.479	0.497	0.570	1F5M_A	3.30.450.40.2.1
5	blast.3	1e-40	0.484	0.509	0.611	1VHM_A	3.30.450.40.2.2
6	ffas.3	-0.923E+02	0.585	0.634	0.829	1VHM_A	3.30.450.40.2.2
7	pgenthreader.1	102.425	0.532	0.594	0.841	1VHM_A	3.30.450.40.2.2
8	rpsblast.4	2e-21	0.515	0.550	0.688	1VHM_A	3.30.450.40.2.2
9	ffas.14	-0.206E+02	0.389	0.410	0.496	2QYB_A	N/A
10	ffas.18	-0.194E+02	0.293	0.299	0.323	2VJW_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.