Pcons.net Protein Structure Prediction

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Tuesday, April 23 2024

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Submission

23213 : CPOX_I.ric_008

Your submitted sequence: sequence (373 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.1	2e-93	0.319	0.389	0.667	2AEX_A	N/A
2	rpsblast.3	2e-87	0.328	0.382	0.596	1VJU_B	3.40.1500.10.1.1
3	rpsblast.4	3e-85	0.327	0.380	0.594	3E8J_A	N/A
4	pgenthreader.1	17.700	0.302	0.373	0.659	2AEX_A	N/A
5	blast.1	5e-82	0.297	0.370	0.661	2AEX_A	N/A
6	pgenthreader.8	107.855	0.304	0.365	0.607	3E8J_A	N/A
7	pgenthreader.5	132.603	0.306	0.359	0.570	1VJU_A	3.40.1500.10.1.1
8	ffas.4	-0.114E+03	0.279	0.357	0.667	2AEX_A	N/A
9	pgenthreader.3	16.440	0.286	0.352	0.615	1TKL_A	3.40.1500.10.1.2
10	ffas.2	-0.116E+03	0.286	0.345	0.582	1VJU_A	3.40.1500.10.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.