Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, May 3 2024

Main Menu

Submission

23277 : DMTfull

Your submitted sequence: sequence (623 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.13	-0.139E+02	0.092	0.098	0.124	1JMV_A	3.40.50.620.25.1
2	ffas.2	-0.189E+02	0.127	0.130	0.142	1MJH_A	3.40.50.620.22.1
3	pgenthreader.1	78.372	0.110	0.118	0.150	1MJH_A	3.40.50.620.22.1
4	rpsblast.5	1e-14	0.117	0.123	0.145	1MJH_A	3.40.50.620.22.1
5	ffas.5	-0.169E+02	0.068	0.076	0.107	1Q77_A	3.40.50.620.41.1
6	rpsblast.7	4e-14	0.062	0.068	0.093	1Q77_B	3.40.50.620.41.1
7	ffas.9	-0.157E+02	0.093	0.094	0.096	1TQ8_A	3.40.50.620.39.1
8	pgenthreader.5	66.909	0.080	0.083	0.097	1TQ8_A	3.40.50.620.39.1
9	rpsblast.3	6e-16	0.069	0.066	0.055	1TQ8_D	3.40.50.620.39.1
10	ffas.3	-0.180E+02	0.106	0.108	0.118	1WJG_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.