Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, May 7 2024

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Submission

23284 : LLCBL2

Your submitted sequence: sequence (475 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.20	-0.778E+02	0.079	0.124	0.305	1BZ7_A	2.60.40.10.4.7 2.60.40.10.2.2
2	ffas.14	-0.793E+02	0.080	0.129	0.327	1C5B_L	2.60.40.10.4.3 2.60.40.10.2.2
3	ffas.19	-0.778E+02	0.120	0.159	0.314	1F3R_B	2.60.40.10.23.3 2.60.40.10.165.1
4	ffas.11	-0.831E+02	0.197	0.240	0.411	1H8N_A	2.60.40.10.3.1 2.60.40.10.10.1
5	rpsblast.4	7e-62	0.203	0.238	0.379	1H8N_A	2.60.40.10.3.1 2.60.40.10.10.1
6	ffas.3	-0.895E+02	0.187	0.233	0.415	1JP5_A	2.60.40.10.20.1 2.60.40.10.38.2
7	ffas.8	-0.851E+02	0.122	0.171	0.368	1MOE_A	2.60.40.10.4.2 2.60.40.10.118.1
8	pgenthreader.5	99.486	0.119	0.136	0.203	1MOE_A	2.60.40.10.4.2 2.60.40.10.118.1
9	pgenthreader.6	99.486	0.068	0.108	0.270	1MOE_A	2.60.40.10.4.2 2.60.40.10.118.1
10	ffas.16	-0.785E+02	0.097	0.145	0.338	1Q72_L	2.60.40.10.7.1 2.60.40.10.2.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.