Pcons.net Protein Structure Prediction

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Wednesday, April 24 2024

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Submission

23303 : Cysteine-proteinase2

Your submitted sequence: sequence (337 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.3	138.687	0.516	0.549	0.681	1BY8_A	3.90.70.10.11.2
2	pgenthreader.1	148.446	0.502	0.537	0.676	1CS8_A	3.90.70.10.11.1
3	ffas.7	-0.108E+03	0.499	0.534	0.673	1BY8_A	3.90.70.10.11.2
4	rpsblast.7	9e-42	0.514	0.531	0.597	3QT4_A	N/A
5	ffas.4	-0.110E+03	0.489	0.529	0.687	1CS8_A	3.90.70.10.11.1
6	pgenthreader.6	131.483	0.503	0.528	0.628	2C0Y_A	N/A
7	ffas.8	-0.106E+03	0.494	0.528	0.664	3QJ3_A	N/A
8	ffas.11	-0.103E+03	0.483	0.521	0.671	3QT4_A	N/A
9	ffas.10	-0.104E+03	0.493	0.520	0.626	2C0Y_A	N/A
10	ffas.5	-0.109E+03	0.476	0.519	0.691	1CJL_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.