Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, May 3 2024

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Submission

23307 : P05C_MRNA16607

Your submitted sequence: sequence (134 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.7	5.6	0.023	0.016	-0.011	1E8U_A	2.120.10.10.9.1
2	ffas.2	-0.671E+01	0.040	0.065	0.165	1IDP_A	3.10.450.50.3.1
3	ffas.9	-0.588E+01	0.032	0.035	0.049	1L1P_A	3.10.50.40.6.1
4	ffas.4	-0.655E+01	0.030	0.023	-0.003	1P85_C	N/A
5	pgenthreader.8	25.409	0.041	0.066	0.164	1QEX_A	N/A
6	pgenthreader.3	26.291	0.022	0.047	0.146	1WJJ_A	N/A
7	ffas.10	-0.583E+01	0.032	0.045	0.095	1YL5_A	3.40.50.720.126.1 3.30.360.10.15.1
8	pgenthreader.1	27.874	0.037	0.090	0.300	1ZLD_A	N/A
9	ffas.8	-0.612E+01	0.041	0.083	0.252	2E6Q_A	N/A
10	ffas.7	-0.622E+01	0.024	0.033	0.069	2H0E_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.