Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23333 : popcorn

Your submitted sequence: sequence (539 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: lomets itasser

PCONS (only used 28 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.2	2e-22	0.060	0.074	0.131	2XPP_A	N/A
2	pgenthreader.2	15.508	0.067	0.074	0.103	3NFQ_A	N/A
3	rpsblast.1	7e-23	0.062	0.068	0.094	3NFQ_A	N/A
4	rpsblast.4	7e-13	0.043	0.053	0.092	1WJT_A	1.25.40.260.1.1
5	ffas.3	-0.264E+02	0.027	0.052	0.150	2XPL_A	N/A
6	ffas.4	-0.261E+02	0.028	0.047	0.124	3OAK_A	N/A
7	ffas.2	-0.270E+02	0.027	0.047	0.125	3O8Z_A	N/A
8	ffas.1	-0.273E+02	0.028	0.043	0.105	3NFQ_A	N/A
9	ffas.5	-0.207E+02	0.021	0.037	0.103	1WJT_A	1.25.40.260.1.1
10	ffas.8	-0.844E+01	0.013	0.034	0.120	3SLA_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.