Pcons.net Protein Structure Prediction

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Friday, April 19 2024

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Submission

23358 : PNPLA2

Your submitted sequence: sequence (504 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.1	55.543	0.052	0.109	0.337	3TU3_B	N/A
2	pgenthreader.2	47.969	0.048	0.090	0.256	1OXW_A	3.40.1090.10.1.1
3	ffas.2	-0.346E+02	0.043	0.083	0.241	1OXW_A	3.40.1090.10.1.1
4	pgenthreader.6	35.107	0.026	0.081	0.303	3ZKV_A	N/A
5	ffas.3	-0.312E+02	0.048	0.072	0.167	3TU3_B	N/A
6	rpsblast.8	2e-04	0.045	0.069	0.165	1OXW_B	3.40.1090.10.1.1
7	ffas.1	-0.355E+02	0.044	0.069	0.168	4AKX_B	N/A
8	pgenthreader.3	37.329	0.023	0.064	0.230	2VA8_A	N/A
9	pgenthreader.4	36.085	0.021	0.058	0.206	3AFH_A	N/A
10	rpsblast.1	2e-24	0.041	0.048	0.078	3TU3_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.