Pcons.net Protein Structure Prediction

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Thursday, April 25 2024

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Submission

23397 : LpAFP1

Your submitted sequence: sequence (14 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcomb	ProQ2	Template	CATH
1	pgenthreader.4	14.000	0.110	0.549	4FG0_A	N/A
2	ffas.2	-0.119E+01	0.100	0.502	3ULT_A	N/A
3	pgenthreader.8	14.000	0.088	0.439	2RA8_A	N/A
4	pgenthreader.2	14.000	0.080	0.401	4AU9_A	N/A
5	pgenthreader.7	14.000	0.078	0.391	1VER_A	N/A
6	pgenthreader.10	14.000	0.075	0.377	2CK2_A	N/A
7	pgenthreader.1	14.000	0.065	0.326	3ULT_A	N/A
8	ffas.6	-0.763E+00	0.064	0.320	1HY9_A	4.10.40.30.1.1
9	pgenthreader.5	14.000	0.061	0.303	2O04_A	N/A
10	ffas.10	-0.660E+00	0.054	0.269	2C1L_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.