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© Arne Elofsson

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23405 :

Your submitted sequence: sequence (154 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.1
-0.704E+010.1180.1720.390 1TU1_AN/A
2
ffas.4
-0.673E+010.0960.1640.436 3HLZ_AN/A
3
ffas.5
-0.669E+010.0960.1540.387 3LYD_AN/A
4
pgenthreader.1
42.7970.0660.1480.477 2XB3_AN/A
5
pgenthreader.6
35.9990.0670.1470.465 2LNJ_AN/A
6
pgenthreader.4
38.4640.0670.1460.460 1V2B_A3.40.1000.10.1.1
7
pgenthreader.3
40.0680.0700.1440.442 1TU1_AN/A
8
pgenthreader.5
36.3360.0680.1370.413 3LYD_AN/A
9
pgenthreader.10
32.5590.0630.1350.422 1JHS_A3.40.1000.10.2.1
10
pgenthreader.2
41.9630.0600.1250.386 3HLZ_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center