Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Monday, May 6 2024

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Submission

23409 : UNK

Your submitted sequence: sequence (341 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.10	-0.104E+03	0.459	0.501	0.671	1CDK_A	1.10.510.10.1.1 3.30.200.20.31.1
2	ffas.13	-0.104E+03	0.414	0.460	0.642	1FOT_A	1.10.510.10.1.3 3.30.200.20.31.2
3	ffas.1	-0.106E+03	0.368	0.411	0.583	1MRV_A	1.10.510.10.5.1 3.30.200.20.5.3
4	pgenthreader.1	15.197	0.608	0.616	0.650	1O6L_A	1.10.510.10.5.1 3.30.200.20.34.1
5	pgenthreader.2	15.197	0.010	0.017	0.047	1O6L_A	1.10.510.10.5.1 3.30.200.20.34.1
6	rpsblast.4	1e-122	0.545	0.563	0.637	1O6L_A	1.10.510.10.5.1 3.30.200.20.34.1
7	pgenthreader.9	205.032	0.616	0.621	0.642	1RDQ_E	1.10.510.10.1.1 3.30.200.20.31.1
8	ffas.9	-0.104E+03	0.473	0.509	0.655	1SMH_A	1.10.510.10.1.1 3.30.200.20.31.1
9	rpsblast.7	1e-122	0.386	0.426	0.588	1U5Q_B	N/A
10	ffas.8	-0.104E+03	0.468	0.507	0.664	1YDR_E	1.10.510.10.1.1 3.30.200.20.31.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.