Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Monday, April 29 2024

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Submission

23413 : Target 4

Your submitted sequence: sequence (133 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.6	36.103	0.075	0.183	0.614	1JHS_A	3.40.1000.10.2.1
2	ffas.3	-0.695E+01	0.079	0.063	-0.001	1MIO_B	3.40.50.1980.2.2 3.40.50.1980.20.1 1.20.89.10.1.2 3.40.50.1980.21.1
3	rpsblast.5	5.5	0.082	0.073	0.039	1MIO_D	3.40.50.1980.2.2 3.40.50.1980.20.1 1.20.89.10.1.2 3.40.50.1980.21.1
4	ffas.7	-0.626E+01	0.056	0.073	0.141	1OLZ_A	2.130.10.10.20.1 3.30.1680.10.1.1 2.60.40.10.98.1
5	rpsblast.2	0.059	0.042	0.022	-0.058	1QZV_U	N/A
6	ffas.1	-0.729E+01	0.117	0.171	0.385	1TU1_A	N/A
7	pgenthreader.3	40.463	0.084	0.159	0.461	1TU1_A	N/A
8	pgenthreader.5	36.362	0.076	0.180	0.596	1V2B_A	3.40.1000.10.1.1
9	pgenthreader.10	32.736	0.071	0.155	0.491	1VR8_A	N/A
10	rpsblast.10	17	0.055	0.030	-0.068	2AR0_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.