Pcons.net Protein Structure Prediction

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Saturday, April 20 2024

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23417 :

Your submitted sequence: sequence (134 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.9	7e-16	0.508	0.507	0.503	2D9Y_A	2.30.29.30.4.2
2	ffas.8	-0.565E+02	0.474	0.491	0.559	1EAZ_A	2.30.29.30.5.1
3	pgenthreader.8	59.870	0.483	0.487	0.503	2I5F_A	N/A
4	ffas.3	-0.575E+02	0.479	0.485	0.510	1FAO_A	2.30.29.30.13.1
5	pgenthreader.4	60.970	0.481	0.483	0.491	1U29_A	2.30.29.30.2.1
6	pgenthreader.1	65.181	0.459	0.479	0.561	4KAX_B	N/A
7	pgenthreader.5	60.761	0.468	0.475	0.501	2D9Y_A	2.30.29.30.4.2
8	ffas.11	-0.558E+02	0.466	0.473	0.502	1ZM0_A	2.30.29.30.22.1
9	pgenthreader.9	59.319	0.470	0.473	0.484	1FAO_A	2.30.29.30.13.1
10	ffas.17	-0.544E+02	0.463	0.472	0.507	2DN6_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.