Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Sunday, May 5 2024

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Submission

23419 :

Your submitted sequence: sequence (153 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.586E+02	0.334	0.320	0.262	1EAZ_A	2.30.29.30.5.1
2	ffas.2	-0.580E+02	0.315	0.296	0.221	1FAO_A	2.30.29.30.13.1
3	ffas.13	-0.549E+02	0.273	0.279	0.305	1U2B_A	2.30.29.30.2.1
4	ffas.12	-0.549E+02	0.312	0.297	0.238	1U5F_A	N/A
5	pgenthreader.9	53.422	0.310	0.308	0.299	1U5F_A	N/A
6	ffas.8	-0.553E+02	0.310	0.311	0.316	1U5G_A	N/A
7	ffas.10	-0.552E+02	0.332	0.332	0.332	1UPQ_A	2.30.29.30.4.1
8	pgenthreader.3	56.451	0.347	0.354	0.382	1UPQ_A	2.30.29.30.4.1
9	rpsblast.4	6e-20	0.276	0.275	0.273	1UPQ_A	2.30.29.30.4.1
10	rpsblast.5	4e-19	0.282	0.273	0.236	1V5M_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.