Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 17 2024

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Submission

23421 : PH protein for PNW86274

Your submitted sequence: sequence (156 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.2	62.170	0.376	0.404	0.516	1V89_A	2.30.29.30.32.1
2	pgenthreader.10	55.055	0.373	0.399	0.501	1UPQ_A	2.30.29.30.4.1
3	ffas.18	-0.493E+02	0.366	0.398	0.526	1UPQ_A	2.30.29.30.4.1
4	ffas.1	-0.538E+02	0.357	0.395	0.546	1X05_A	2.30.29.30.22.1
5	pgenthreader.1	62.684	0.361	0.390	0.508	2D9Y_A	2.30.29.30.4.2
6	pgenthreader.6	58.515	0.364	0.386	0.474	2DHJ_A	N/A
7	ffas.9	-0.510E+02	0.360	0.383	0.475	1V89_A	2.30.29.30.32.1
8	ffas.2	-0.537E+02	0.365	0.380	0.441	1U2B_A	2.30.29.30.2.1
9	ffas.12	-0.500E+02	0.359	0.378	0.455	1U5F_A	N/A
10	pgenthreader.3	59.782	0.351	0.376	0.477	1X05_A	2.30.29.30.22.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.