Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23425 : PH domain

Your submitted sequence: sequence (119 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.3	-0.605E+02	0.547	0.571	0.667	1EAZ_A	2.30.29.30.5.1
2	rpsblast.1	2e-25	0.547	0.566	0.644	2DN6_A	N/A
3	ffas.1	-0.638E+02	0.547	0.566	0.640	2DN6_A	N/A
4	ffas.2	-0.622E+02	0.541	0.565	0.659	1FAO_A	2.30.29.30.13.1
5	ffas.6	-0.584E+02	0.542	0.562	0.640	1V89_A	2.30.29.30.32.1
6	pgenthreader.3	64.975	0.530	0.560	0.682	1EAZ_A	2.30.29.30.5.1
7	pgenthreader.5	63.456	0.532	0.555	0.646	2DN6_A	N/A
8	pgenthreader.9	61.478	0.523	0.551	0.661	1V89_A	2.30.29.30.32.1
9	ffas.10	-0.564E+02	0.528	0.549	0.633	3NSU_A	N/A
10	pgenthreader.4	64.279	0.518	0.542	0.637	1U29_A	2.30.29.30.2.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.