Pcons.net Protein Structure Prediction

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Thursday, April 25 2024

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Submission

23426 : RT lipase pcons

Your submitted sequence: sequence (377 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 38 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.2	1e-22	0.283	0.295	0.341	4FKB_A	N/A
2	rpsblast.1	2e-24	0.262	0.273	0.316	2HIH_B	N/A
3	ffas.8	-0.503E+02	0.202	0.257	0.476	1HQD_A	3.40.50.1820.1.1
4	ffas.9	-0.496E+02	0.196	0.256	0.497	1CVL_A	N/A
5	pgenthreader.5	83.818	0.217	0.246	0.361	1CVL_A	N/A
6	ffas.6	-0.617E+02	0.195	0.245	0.444	1EX9_A	3.40.50.1820.1.2
7	pgenthreader.1	87.385	0.221	0.241	0.323	1EX9_A	3.40.50.1820.1.2
8	ffas.7	-0.613E+02	0.201	0.238	0.387	2HIH_A	N/A
9	pgenthreader.6	77.174	0.215	0.236	0.321	1YS1_X	3.40.50.1820.1.1
10	ffas.3	-0.647E+02	0.193	0.229	0.372	2W22_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.