Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, May 4 2024

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Submission

23445 : id:23444:1-23,78-367

Your submitted sequence: sequence (313 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.8	-0.241E+02	0.194	0.212	0.286	1BXD_A	3.30.565.10.15.1
2	rpsblast.7	4e-06	0.118	0.129	0.173	1I58_A	3.30.565.10.2.1
3	ffas.10	-0.233E+02	0.225	0.241	0.305	1ID0_A	3.30.565.10.10.1
4	pgenthreader.9	62.694	0.202	0.223	0.305	1ID0_A	3.30.565.10.10.1
5	ffas.16	-0.215E+02	0.188	0.219	0.343	1JM6_A	3.30.565.10.13.1 1.20.140.20.2.1
6	ffas.15	-0.218E+02	0.171	0.183	0.232	1L0O_A	3.30.565.10.14.1
7	ffas.17	-0.213E+02	0.170	0.182	0.232	1TH8_A	3.30.565.10.14.1
8	ffas.14	-0.218E+02	0.171	0.184	0.234	1TIL_A	3.30.565.10.14.1
9	ffas.12	-0.223E+02	0.186	0.219	0.353	1Y8N_A	1.20.140.20.2.1 3.30.565.10.13.1
10	ffas.9	-0.238E+02	0.212	0.226	0.281	1YS3_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.