Pcons.net Protein Structure Prediction

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Thursday, April 25 2024

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Submission

23449 : XP_027255780.1 DELTA-TYPE OPIOID RECEPTOR ISOFORM X2 [CRICETULUS GRISEUS]

Your submitted sequence: sequence (385 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.1	97.313	0.162	0.224	0.473	4N6H_A	N/A
2	pgenthreader.7	80.321	0.143	0.213	0.494	4DJH_A	N/A
3	ffas.2	-0.871E+02	0.116	0.210	0.585	2KS9_A	N/A
4	ffas.7	-0.775E+02	0.118	0.209	0.573	4DKL_A	N/A
5	ffas.3	-0.816E+02	0.113	0.205	0.572	4DJH_A	N/A
6	pgenthreader.2	17.000	0.139	0.204	0.463	2KS9_A	N/A
7	pgenthreader.6	80.565	0.149	0.203	0.420	4EJ4_A	N/A
8	pgenthreader.4	83.036	0.147	0.202	0.420	4EA3_A	N/A
9	ffas.14	-0.673E+02	0.104	0.201	0.587	2Z73_A	N/A
10	ffas.5	-0.800E+02	0.108	0.199	0.564	4EJ4_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.