Pcons.net Protein Structure Prediction

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Friday, April 19 2024

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Submission

23458 : Sod_Pcons

Your submitted sequence: sequence (154 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.13	-0.935E+02	0.919	0.926	0.955	3GTV_A	N/A
2	ffas.11	-0.936E+02	0.923	0.925	0.934	3GTT_A	N/A
3	ffas.8	-0.937E+02	0.923	0.924	0.930	1HL4_A	2.60.40.200.1.1
4	ffas.16	-0.916E+02	0.921	0.921	0.921	2ZKY_A	N/A
5	rpsblast.1	2e-53	0.909	0.920	0.966	3GTT_E	N/A
6	ffas.3	-0.941E+02	0.924	0.919	0.898	2NNX_A	2.60.40.200.1.1
7	ffas.1	-0.951E+02	0.921	0.918	0.908	1N18_A	2.60.40.200.1.1
8	ffas.6	-0.937E+02	0.918	0.917	0.911	3RE0	N/A
9	ffas.19	-0.914E+02	0.912	0.915	0.928	2ZKW_A	N/A
10	ffas.12	-0.936E+02	0.915	0.915	0.914	3LTV_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.