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© Arne Elofsson

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23466 : 6gx5

Your submitted sequence: sequence (758 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.8
59.4690.0090.0480.203 3H0G_BN/A
2
pgenthreader.3
67.4100.0050.0470.214 4DUR_AN/A
3
pgenthreader.1
14.0000.0070.0410.179 2INY_AN/A
4
pgenthreader.6
26.5070.0060.0410.183 3PMQ_AN/A
5
ffas.5
-0.612E+010.0070.0360.154 3H0G_AN/A
6
pgenthreader.9
19.6540.0070.0300.122 1N7D_AN/A
7
pgenthreader.4
25.3800.0050.0290.126 1S58_A2.170.30.10.3.1
8
pgenthreader.10
19.6540.0020.0290.136 1N7D_AN/A
9
rpsblast.9
0.620.0040.0230.097 2XAH_AN/A
10
rpsblast.8
0.570.0000.0210.106 2PFF_BN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center