Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Monday, April 29 2024

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Submission

23473 : f

Your submitted sequence: sequence (128 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.10	-0.558E+01	0.026	-0.012	-0.164	1AZZ_A	2.40.10.10.58.3 2.40.10.10.45.2
2	pgenthreader.3	39.054	0.052	0.045	0.019	1EQ7_A	1.20.5.190.1.1
3	pgenthreader.8	24.313	0.063	0.082	0.157	1IA6_A	1.50.10.10.3.3
4	pgenthreader.4	35.905	0.075	0.099	0.197	1JCD_A	1.20.5.190.1.1
5	rpsblast.5	7e-04	0.054	0.044	0.004	1JCD_A	1.20.5.190.1.1
6	pgenthreader.2	39.267	0.064	0.079	0.138	1KFN_A	1.20.5.190.1.1
7	rpsblast.6	7e-04	0.055	0.069	0.124	1KFN_A	1.20.5.190.1.1
8	pgenthreader.1	45.410	0.068	0.079	0.125	1T8Z_A	1.20.5.190.1.1
9	rpsblast.1	1e-09	0.059	0.071	0.117	1T8Z_D	1.20.5.190.1.1
10	pgenthreader.10	24.130	0.027	0.052	0.152	1YYB_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.