Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Sunday, May 5 2024

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Submission

23476 : osbp

Your submitted sequence: sequence (423 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.620E+01	0.012	0.021	0.058	1FH2_A	2.60.40.180.1.1
2	ffas.7	-0.644E+01	0.013	0.028	0.086	1G1O_A	2.60.40.180.1.1
3	ffas.4	-0.664E+01	0.013	0.028	0.090	1GKO_A	2.60.40.180.1.1
4	ffas.3	-0.677E+01	0.013	0.021	0.053	1H04_P	2.10.70.10.2.1 2.10.70.10.1.1
5	ffas.5	-0.657E+01	0.016	0.033	0.103	1IE4_A	2.60.40.180.1.1
6	pgenthreader.4	34.037	0.017	0.035	0.109	1IGY_B	2.60.40.10.6.4 2.60.40.10.8.1 2.60.40.10.29.2 2.60.40.10.18.2
7	ffas.10	-0.603E+01	0.012	0.020	0.050	1IJN_A	2.60.40.180.1.1
8	pgenthreader.5	33.532	0.016	0.029	0.079	1JHN_A	2.60.120.200.42.1 2.10.250.10.1.1
9	rpsblast.6	0.013	0.001	-0.000	-0.006	1QZV_U	N/A
10	rpsblast.7	0.050	0.001	0.004	0.014	1QZV_U	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.