Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 16 2024

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Submission

23477 : TSP9

Your submitted sequence: sequence (150 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.383E+02	0.100	0.164	0.420	2ZET_C	N/A
2	rpsblast.2	1e-10	0.110	0.143	0.275	2ZET_D	N/A
3	rpsblast.1	5e-14	0.126	0.141	0.199	1ZBD_B	3.30.40.10.6.1
4	ffas.3	-0.287E+02	0.093	0.135	0.302	1JOC_A	1.20.5.390.1.1 3.30.40.10.1.3
5	pgenthreader.2	31.492	0.118	0.125	0.151	2ZET_C	N/A
6	rpsblast.10	0.034	0.125	0.121	0.105	1Z2Q_A	N/A
7	pgenthreader.7	25.105	0.117	0.115	0.107	1JOC_A	1.20.5.390.1.1 3.30.40.10.1.3
8	ffas.2	-0.354E+02	0.093	0.115	0.202	1ZBD_B	3.30.40.10.6.1
9	ffas.20	-0.111E+02	0.083	0.111	0.224	1DVP_A	1.25.40.90.2.2 3.30.40.10.1.2
10	pgenthreader.1	47.166	0.113	0.108	0.087	2CJS_C	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.