Pcons.net Protein Structure Prediction

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Saturday, April 20 2024

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Submission

23508 : tav_christopher

Your submitted sequence: sequence (104 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.1	5e-29	0.093	0.148	0.369	2ZI0_A	N/A
2	ffas.1	-0.417E+02	0.060	0.122	0.369	2ZI0_A	N/A
3	ffas.2	-0.412E+02	0.047	0.087	0.249	3CZ3_A	N/A
4	pgenthreader.1	46.573	0.069	0.075	0.101	2ZI0_A	N/A
5	ffas.10	-0.703E+01	0.042	0.068	0.172	3R66_A	N/A
6	rpsblast.9	2.8	0.035	0.062	0.172	3UMT_A	N/A
7	ffas.4	-0.941E+01	0.024	0.061	0.209	3IZB_M	N/A
8	rpsblast.8	0.66	0.038	0.059	0.143	1EEQ_A	2.60.40.10.3.2
9	ffas.9	-0.833E+01	0.024	0.056	0.186	1VS5_M	N/A
10	rpsblast.6	0.54	0.032	0.050	0.124	3CX5_V	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.