Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, May 3 2024

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Submission

23508 : tav_christopher

Your submitted sequence: sequence (104 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.8	0.66	0.038	0.059	0.143	1EEQ_A	2.60.40.10.3.2
2	ffas.8	-0.836E+01	0.027	0.044	0.111	1FJG_M	1.10.8.50.2.2 4.10.910.10.1.1
3	pgenthreader.6	16.059	0.010	0.004	-0.018	1JOU_C	4.10.140.10.1.1
4	pgenthreader.7	16.059	0.040	0.030	-0.008	1JOU_C	4.10.140.10.1.1
5	pgenthreader.10	21.658	0.003	0.012	0.049	1UX6_A	4.10.1080.10.1.1 2.60.120.200.15.1
6	ffas.9	-0.833E+01	0.024	0.056	0.186	1VS5_M	N/A
7	pgenthreader.3	14.232	0.013	0.006	-0.024	1W9N_A	N/A
8	pgenthreader.4	14.232	0.031	0.018	-0.034	1W9N_A	N/A
9	pgenthreader.8	21.849	0.003	0.015	0.063	2EC3_A	N/A
10	pgenthreader.2	24.763	0.010	0.022	0.069	2EQE_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.