Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23514 : p56542

Your submitted sequence: sequence (353 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.1	42.018	0.022	0.116	0.490	1RRK_A	N/A
2	pgenthreader.2	41.311	0.024	0.115	0.480	3NXP_A	N/A
3	pgenthreader.7	38.218	0.025	0.114	0.468	1Z8G_A	3.10.250.10.1.1 2.40.10.10.22.3 2.40.10.10.38.1
4	pgenthreader.10	37.345	0.021	0.104	0.437	3UJ4_A	N/A
5	pgenthreader.4	38.840	0.025	0.104	0.420	2WFT_A	N/A
6	pgenthreader.3	40.723	0.023	0.102	0.420	4IGD_A	N/A
7	pgenthreader.8	37.838	0.017	0.086	0.362	4DUR_A	N/A
8	ffas.5	-0.684E+01	0.020	0.075	0.296	1YKK_A	2.60.130.10.1.2
9	ffas.6	-0.684E+01	0.020	0.075	0.295	3T63	N/A
10	ffas.8	-0.662E+01	0.020	0.075	0.295	1EO2_A	2.60.130.10.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.