Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23567 : maryam-6

Your submitted sequence: sequence (379 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.3	40.357	0.024	0.116	0.486	3KL0_A	N/A
2	pgenthreader.7	39.380	0.019	0.116	0.502	2IOQ_A	N/A
3	pgenthreader.5	15.218	0.018	0.109	0.473	1ZSQ_A	N/A
4	pgenthreader.10	38.888	0.023	0.106	0.437	4LT5_A	N/A
5	pgenthreader.8	39.072	0.019	0.092	0.385	1TA3_A	3.20.20.80.51.1
6	rpsblast.1	9e-52	0.072	0.090	0.161	4FP5_G	N/A
7	ffas.1	-0.687E+02	0.054	0.076	0.163	1QB5_D	2.40.50.50.1.1
8	rpsblast.4	0.002	0.014	0.075	0.318	2PFF_B	N/A
9	ffas.6	-0.647E+01	0.053	0.074	0.157	1B44_D	2.40.50.110.1.1
10	ffas.10	-0.564E+01	0.049	0.071	0.157	2WV6_D	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.