Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23576 : A

Your submitted sequence: sequence (344 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser
Queued at server: blast sam-t02 fugue lomets hhpred2

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.6	152.478	0.584	0.597	0.651	2NLK_A	N/A
2	pgenthreader.8	149.642	0.584	0.591	0.620	3I36_A	N/A
3	rpsblast.6	4e-31	0.578	0.590	0.639	1YGU_B	3.90.190.10.3.4
4	pgenthreader.3	155.442	0.577	0.586	0.621	2H4V_A	N/A
5	pgenthreader.9	147.279	0.575	0.585	0.624	3S3E_A	N/A
6	ffas.16	-0.105E+03	0.572	0.583	0.629	1RPM_A	3.90.190.10.3.3
7	ffas.10	-0.106E+03	0.569	0.583	0.641	3I36_A	N/A
8	pgenthreader.10	143.934	0.584	0.583	0.579	2OOQ_A	N/A
9	ffas.12	-0.106E+03	0.574	0.579	0.598	2NV5_A	N/A
10	ffas.11	-0.106E+03	0.572	0.578	0.601	1YFO_A	3.90.190.10.3.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.