Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Sunday, May 5 2024

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Submission

23610 : 3-3

Your submitted sequence: sequence (114 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast itasser hhpred2
Queued at server: sam-t02 fugue lomets

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.13	-0.413E+02	0.201	0.196	0.177	1AWJ_A	N/A
2	ffas.18	-0.405E+02	0.280	0.281	0.284	1AWW_A	N/A
3	rpsblast.8	1e-18	0.326	0.318	0.288	1B07_A	2.30.30.40.10.1
4	pgenthreader.1	57.579	0.383	0.361	0.272	1CKA_A	2.30.30.40.10.1
5	rpsblast.1	7e-21	0.323	0.313	0.272	1CKA_A	2.30.30.40.10.1
6	rpsblast.7	1e-18	0.300	0.290	0.249	1GL5_A	2.30.30.40.33.2
7	pgenthreader.9	41.489	0.378	0.361	0.295	1GRI_A	2.30.30.40.28.1 3.30.505.10.4.1 2.30.30.40.13.2
8	rpsblast.2	1e-19	0.270	0.262	0.232	1QLY_A	2.30.30.40.33.1
9	ffas.15	-0.408E+02	0.294	0.290	0.276	1UDL_A	2.30.30.40.43.1
10	pgenthreader.10	41.479	0.372	0.355	0.289	1UDL_A	2.30.30.40.43.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.